Cory, your quad is going to be psychotic.

Air box open, more air, so up the main and pilot for more fuel, plus richen it up with moving the notch on the needle and lean it out with the screw out 3 turns. Damn thing is going to go postal!
I sometimes get dirt bikes where the previous owner tried all sorts of tricks to improve HP by going from a 30 pilot to a 50, trying all sorts of main jet sizes, screw in or out the air mixture screw way too far, adjust the needle collar... etc. etc. They eventually get so fed up with trying to get their bike back running right, they sell it for way less than it is worth. I take it, and set everything back to stock, clean the air filter (which seems to be something dirt bikers don't like to do and causes them the most grief trying to get their pilots and air mixtures correct) and make slight adjustments to get it back into a fine tuned machine.
Not saying what you are looking to do doesn't work for you and it probably gives you more speed at the right time. I have to believe the engine may not be able to burn all the extra fuel coming in and thus some of the fuel is just going out the pipe unused. I certainly don't know for sure, but for a normal weekend rider, they are better off going with stock settings or settings recommended by the pipe and/or carb manufacturer. With the fuel and exhaust system, every action has an opposite and equal reaction meaning, if you change one thing, you need to change another and in the end, you have to assess if you are better or worse than you were before for the type or riding that is being done.